STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADE84774.1Peptidase, S24 family. (203 aa)    
Predicted Functional Partners:
ADE84765.1
Integrase, catalytic region.
 
     0.848
ADE84766.1
Conserved hypothetical protein.
 
     0.793
ADE84764.1
Bacteriophage DNA transposition B protein.
 
     0.781
ADE84690.1
Phage conserved hypothetical protein.
   
    0.745
ADE84748.1
Phage conserved hypothetical protein.
 
     0.736
ADE84749.1
Protein of unknown function DUF1804.
 
     0.726
ADE84744.1
Phage head morphogenesis protein, putative.
 
     0.687
ADE84737.1
Phage conserved hypothetical protein.
 
     0.682
ADE84745.1
Phage conserved hypothetical protein.
 
     0.681
ADE84742.1
Phage conserved hypothetical protein.
 
   
 0.673
Your Current Organism:
Rhodobacter capsulatus
NCBI taxonomy Id: 272942
Other names: R. capsulatus SB 1003, Rhodobacter capsulatus SB 1003
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.