STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADE84780.1Diguanylate cyclase/phosphodiesterase family protein. (592 aa)    
Predicted Functional Partners:
ADE84323.1
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor.
 
 
0.901
dorS
DMSO/TMAO-sensor hybrid histidine kinase.
 
  
 0.892
ADE84548.1
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor.
 
 
0.870
ADE84408.1
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor.
 
 
0.842
ADE86269.1
Diguanylate cyclase/phosphodiesterase.
 
 
0.842
ADE86359.1
Diguanylate cyclase/phosphodiesterase.
  
 0.830
ADE84868.1
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor.
 
 
0.820
ADE86249.1
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor.
 
 
0.820
ADE85251.1
Signal transduction histidine kinase.
 
 
 0.809
ADE85918.1
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor.
 
 
0.788
Your Current Organism:
Rhodobacter capsulatus
NCBI taxonomy Id: 272942
Other names: R. capsulatus SB 1003, Rhodobacter capsulatus SB 1003
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.