STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADE84966.1Cell wall hydrolase, SleB. (233 aa)    
Predicted Functional Partners:
folB
Dihydroneopterin aldolase.
       0.707
folP
Dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives.
       0.642
ppdK
Pyruvate, phosphate dikinase (Pyruvate, orthophosphatedikinase).
       0.628
glmM
Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.
       0.548
glyS
glycyl-tRNA synthetase, beta subunit.
       0.470
ADE85295.1
Peptidase, M23B subfamily.
  
   
 0.466
ADE86157.1
Peptidase, M23 family/LysM domain protein.
  
   
 0.464
ADE85294.1
Protein of unknown function DUF583.
  
   
 0.460
dacC1
D-alanyl-D-alanine carboxypeptidase-1; Belongs to the peptidase S11 family.
  
    0.456
ADE84963.1
Conserved hypothetical protein.
       0.439
Your Current Organism:
Rhodobacter capsulatus
NCBI taxonomy Id: 272942
Other names: R. capsulatus SB 1003, Rhodobacter capsulatus SB 1003
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.