STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
modType III restriction-modification system RcaSBIIP, Mod subunit. (597 aa)    
Predicted Functional Partners:
res
Type III restriction-modification system RcaSBIIP, Res subunit.
 
     0.956
cysA
Sulfate ABC transporter, ATP-binding protein CysA; Belongs to the ABC transporter superfamily. Sulfate/tungstate importer (TC 3.A.1.6) family.
      
 0.737
modC1
Molybdenum ABC transporter, ATP-binding protein ModC-1; Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Molybdate importer (TC 3.A.1.8) family.
      
 0.727
ADE85989.1
WbqC-like protein family.
   
  
 0.443
fldA
Flavodoxin; Low-potential electron donor to a number of redox enzymes. NifF is the electron donor to nitrogenase; Belongs to the flavodoxin family.
      
 0.420
Your Current Organism:
Rhodobacter capsulatus
NCBI taxonomy Id: 272942
Other names: R. capsulatus SB 1003, Rhodobacter capsulatus SB 1003
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