STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
potA2Polyamine ABC transporter, ATP binding protein PotA-2; Belongs to the ABC transporter superfamily. (358 aa)    
Predicted Functional Partners:
potB2
Polyamine ABC transporter, permease protein PotB-2.
 0.992
potB3
Polyamine ABC transporter, permease protein PotB-3.
 0.965
potB4
Polyamine ABC transporter, permease protein PotB-4.
 0.965
potH1
Polyamine ABC transporter, permease protein PotH-1.
 
 0.962
potH2
Polyamine ABC transporter, permease protein PotH-2.
 
 0.961
potC1
Polyamine ABC transporter, permease protein PotC-1.
 
  
 0.960
potD2
Polyamine ABC transporter, periplasmic polyamine-binding protein PotD-2; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.
 
  
 0.939
potC3
Polyamine ABC transporter, permease protein PotC-3.
 
  
 0.843
potC2
Polyamine ABC transporter, permease protein PotC-2.
 
  
 0.824
potI2
Polyamine ABC transporter, permease protein PotI-2.
 
  
 0.818
Your Current Organism:
Rhodobacter capsulatus
NCBI taxonomy Id: 272942
Other names: R. capsulatus SB 1003, Rhodobacter capsulatus SB 1003
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.