STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gcvAGlycine cleavage system transcriptional activator; Belongs to the LysR transcriptional regulatory family. (307 aa)    
Predicted Functional Partners:
ADE85213.1
FAD dependent oxidoreductase.
 
     0.611
ADE85214.1
Membrane protein, putative.
 
     0.563
ADE85211.1
Glutamate synthase domain protein; Belongs to the glutamate synthase family.
     
 0.560
ADE84181.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.530
gltB
Glutamate synthase (NADPH), alpha subunit.
  
  
 0.504
ADE86002.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.493
aspC1
Aspartate aminotransferase-1.
  
    0.482
ADE85215.1
L-aminoadipate-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
       0.479
ADE84183.1
Transcriptional regulator, TetR family.
  
 
   0.404
Your Current Organism:
Rhodobacter capsulatus
NCBI taxonomy Id: 272942
Other names: R. capsulatus SB 1003, Rhodobacter capsulatus SB 1003
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