STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADE85294.1Protein of unknown function DUF583. (168 aa)    
Predicted Functional Partners:
ADE85295.1
Peptidase, M23B subfamily.
 
   
 0.931
bcp
Peroxiredoxin.
     
 0.661
ADE85451.1
Septum formation initiator.
 
     0.610
murF
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.
  
 
 
 0.542
mreC
Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape.
 
     0.534
ftsI
Peptidoglycan synthetase FtsI.
 
   
 0.530
ADE84244.1
Ubiquinone biosynthesis protein, COQ9 family.
  
     0.487
ADE85297.1
Conserved hypothetical protein.
       0.468
ADE86836.1
Conserved hypothetical protein.
  
     0.464
ADE84966.1
Cell wall hydrolase, SleB.
  
   
 0.460
Your Current Organism:
Rhodobacter capsulatus
NCBI taxonomy Id: 272942
Other names: R. capsulatus SB 1003, Rhodobacter capsulatus SB 1003
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.