STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADE85400.1TPR repeat domain protein. (180 aa)    
Predicted Functional Partners:
ADE85399.1
Conserved hypothetical protein.
 
 
   0.904
ADE85398.1
YVTN beta-propeller repeat family protein.
 
     0.895
ADE85397.1
Conserved hypothetical protein.
 
     0.881
exaA2
Quinoprotein ethanol dehydrogenase-2.
 
   
 0.827
ADE85395.1
ABC transporter, permease protein.
 
    0.817
ADE85405.1
Signal transduction histidine kinase.
 
 
 
 0.814
ADE85390.1
Lipoprotein, putative.
 
   
 0.799
ADE85391.1
Cytochrome c domain protein.
 
     0.790
ADE85389.1
FMN-binding domain protein.
  
     0.773
ADE85404.1
Protein of unknown function DUF1745.
 
     0.768
Your Current Organism:
Rhodobacter capsulatus
NCBI taxonomy Id: 272942
Other names: R. capsulatus SB 1003, Rhodobacter capsulatus SB 1003
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.