STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bglABeta-glucosidase A. (442 aa)    
Predicted Functional Partners:
aglA
Alpha-glucosidase.
 
 
 0.951
bglX
Periplasmic beta-glucosidase.
 
  
 0.932
ADE85588.1
Glycosyl hydrolase, family 13.
 
 
 0.927
ADE85515.1
Transcriptional regulator, LacI family.
 
   
 0.898
glk
Glucokinase; Belongs to the bacterial glucokinase family.
       0.853
aglE
Alpha-glucosides ABC transporter, substrate-binding protein.
 
    0.842
aglG
Alpha-glucoside ABC transporter, permease protein.
 
   
 0.758
aglF
Alpha-glucoside ABC transporter, permease protein.
 
  
 0.750
xylA
Xylose isomerase; Belongs to the xylose isomerase family.
     
 0.747
xylB
Xylulokinase.
   
  
 0.739
Your Current Organism:
Rhodobacter capsulatus
NCBI taxonomy Id: 272942
Other names: R. capsulatus SB 1003, Rhodobacter capsulatus SB 1003
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.