STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADE85686.1Polysaccharide pyruvyl transferase family protein. (398 aa)    
Predicted Functional Partners:
ADE85685.1
FAD dependent oxidoreductase.
 
     0.881
ADE85683.1
Polysaccharide biosynthesis protein family.
 
  
 0.790
ADE85682.1
Membrane protein, putative.
 
     0.775
ADE85687.1
Glycosyl transferase, group 1.
 
    0.766
ADE85688.1
Glycosyl transferase, family 2.
 
     0.737
ADE84728.1
Phage tail assembly protein.
  
     0.572
ADE85689.1
Glycosyl transferase, group 1.
 
    0.570
ADE84731.1
Phage conserved hypothetical protein.
  
     0.531
ADE84727.1
Phage tail fiber protein.
  
     0.459
Your Current Organism:
Rhodobacter capsulatus
NCBI taxonomy Id: 272942
Other names: R. capsulatus SB 1003, Rhodobacter capsulatus SB 1003
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