STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADE85694.1Polysaccharide biosynthesis/export protein family. (459 aa)    
Predicted Functional Partners:
ADE85692.1
Lipopolysaccharide biosynthesis family protein.
 
 
 0.986
wzc
Tyrosine-protein kinase Wzc.
 
 
 0.955
ADE85693.1
Undecaprenyl-phosphate galactosephosphotransferase.
  
  
 0.722
xanB
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
  
 0.682
kpsE1
Capsule polysaccharide export inner-membrane protein KpsE-1.
 
  
 0.677
ADE86803.1
Capsule polysaccharide biosynthesis protein family.
 
  
 0.651
ADE83933.1
ABC polysaccharide export transporter, inner membrane subunit.
 
  
 0.642
kpsE2
Capsule polysaccharide export inner-membrane protein KpsE-2.
 
  
 0.596
kpsT1
Capsule polysaccharide export ATP-binding protein KpsT-1.
 
  
 0.554
capD
Polysaccharide biosynthesis protein CapD.
  
  
 0.524
Your Current Organism:
Rhodobacter capsulatus
NCBI taxonomy Id: 272942
Other names: R. capsulatus SB 1003, Rhodobacter capsulatus SB 1003
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.