STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mtlKMannitol 2-dehydrogenase. (478 aa)    
Predicted Functional Partners:
xylA
Xylose isomerase; Belongs to the xylose isomerase family.
    
 0.985
polS
Sorbitol dehydrogenase.
  
 0.957
cscK
Fructokinase; Belongs to the carbohydrate kinase PfkB family.
 
  
 0.948
fruA
PTS system, fructose-specific EIIBC component.
  
 
 0.944
fruB
Multiphosphoryl transfer protein.
  
  
 0.944
ADE85768.1
Polyols ABC transporter, permease protein.
 
  
 0.937
ADE85767.1
Polyols ABC transporter, permease protein.
 
    0.889
ADE85766.1
Polyols ABC transporter, periplasmic polyols-binding protein.
 
    0.855
ADE85769.1
Polyols ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  
 0.851
ADE85765.1
Transcriptional regulator, DeoR family.
 
     0.624
Your Current Organism:
Rhodobacter capsulatus
NCBI taxonomy Id: 272942
Other names: R. capsulatus SB 1003, Rhodobacter capsulatus SB 1003
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.