potA3 protein (Rhodobacter capsulatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

potA3

Polyamine ABC transporter, ATP-binding protein PotA-3; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. (375 aa)

Predicted Functional Partners:

potB3

0.990

potB2

0.968

potB4

0.967

potH1

0.965

potH2

0.961

potC2

0.950

potD3

0.929

ADE86834.1

0.878

potC3

0.846

potC1

0.837

Your Current Organism:

Rhodobacter capsulatus

NCBI taxonomy Id: 272942
Other names: R. capsulatus SB 1003, Rhodobacter capsulatus SB 1003

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ADE86834.1	potA3	RCAP_rcc03110	RCAP_rcc02269	ABC transporter, ATP-binding/permease protein.	Polyamine ABC transporter, ATP-binding protein PotA-3; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.	0.878
potA3	ADE86834.1	RCAP_rcc02269	RCAP_rcc03110	Polyamine ABC transporter, ATP-binding protein PotA-3; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.	ABC transporter, ATP-binding/permease protein.	0.878
potA3	potB2	RCAP_rcc02269	RCAP_rcc01390	Polyamine ABC transporter, ATP-binding protein PotA-3; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.	Polyamine ABC transporter, permease protein PotB-2.	0.968
potA3	potB3	RCAP_rcc02269	RCAP_rcc02267	Polyamine ABC transporter, ATP-binding protein PotA-3; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.	Polyamine ABC transporter, permease protein PotB-3.	0.990
potA3	potB4	RCAP_rcc02269	RCAP_rcc02450	Polyamine ABC transporter, ATP-binding protein PotA-3; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.	Polyamine ABC transporter, permease protein PotB-4.	0.967
potA3	potC1	RCAP_rcc02269	RCAP_rcc01391	Polyamine ABC transporter, ATP-binding protein PotA-3; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.	Polyamine ABC transporter, permease protein PotC-1.	0.837
potA3	potC2	RCAP_rcc02269	RCAP_rcc02266	Polyamine ABC transporter, ATP-binding protein PotA-3; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.	Polyamine ABC transporter, permease protein PotC-2.	0.950
potA3	potC3	RCAP_rcc02269	RCAP_rcc02449	Polyamine ABC transporter, ATP-binding protein PotA-3; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.	Polyamine ABC transporter, permease protein PotC-3.	0.846
potA3	potD3	RCAP_rcc02269	RCAP_rcc02268	Polyamine ABC transporter, ATP-binding protein PotA-3; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.	Polyamine ABC transporter, periplasmic polyamine-binding protein PotD-3.	0.929
potA3	potH1	RCAP_rcc02269	RCAP_rcc01895	Polyamine ABC transporter, ATP-binding protein PotA-3; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.	Polyamine ABC transporter, permease protein PotH-1.	0.965
potA3	potH2	RCAP_rcc02269	RCAP_rcc02184	Polyamine ABC transporter, ATP-binding protein PotA-3; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.	Polyamine ABC transporter, permease protein PotH-2.	0.961
potB2	potA3	RCAP_rcc01390	RCAP_rcc02269	Polyamine ABC transporter, permease protein PotB-2.	Polyamine ABC transporter, ATP-binding protein PotA-3; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.	0.968
potB2	potC1	RCAP_rcc01390	RCAP_rcc01391	Polyamine ABC transporter, permease protein PotB-2.	Polyamine ABC transporter, permease protein PotC-1.	0.912
potB2	potC2	RCAP_rcc01390	RCAP_rcc02266	Polyamine ABC transporter, permease protein PotB-2.	Polyamine ABC transporter, permease protein PotC-2.	0.644
potB2	potC3	RCAP_rcc01390	RCAP_rcc02449	Polyamine ABC transporter, permease protein PotB-2.	Polyamine ABC transporter, permease protein PotC-3.	0.904
potB2	potD3	RCAP_rcc01390	RCAP_rcc02268	Polyamine ABC transporter, permease protein PotB-2.	Polyamine ABC transporter, periplasmic polyamine-binding protein PotD-3.	0.858
potB3	potA3	RCAP_rcc02267	RCAP_rcc02269	Polyamine ABC transporter, permease protein PotB-3.	Polyamine ABC transporter, ATP-binding protein PotA-3; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.	0.990
potB3	potC1	RCAP_rcc02267	RCAP_rcc01391	Polyamine ABC transporter, permease protein PotB-3.	Polyamine ABC transporter, permease protein PotC-1.	0.876
potB3	potC2	RCAP_rcc02267	RCAP_rcc02266	Polyamine ABC transporter, permease protein PotB-3.	Polyamine ABC transporter, permease protein PotC-2.	0.912
potB3	potC3	RCAP_rcc02267	RCAP_rcc02449	Polyamine ABC transporter, permease protein PotB-3.	Polyamine ABC transporter, permease protein PotC-3.	0.645

page 1 of 4

Server load: medium (44%) [HD]

Permalink

Network

Neighborhood

Experiments

Fusion

Databases

Cooccurrence

Textmining

Coexpression

© STRING Consortium 2025

Credits

Access

Info

About