Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
eda | edd | RCAP_rcc02412 | RCAP_rcc02411 | KHG/KDPG aldolase. | Phosphogluconate dehydratase; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family. | 0.999 |
eda | glk | RCAP_rcc02412 | RCAP_rcc01768 | KHG/KDPG aldolase. | Glucokinase; Belongs to the bacterial glucokinase family. | 0.982 |
eda | pgi | RCAP_rcc02412 | RCAP_rcc02406 | KHG/KDPG aldolase. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.919 |
eda | pgl | RCAP_rcc02412 | RCAP_rcc02407 | KHG/KDPG aldolase. | 6-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate. | 0.856 |
eda | zwf | RCAP_rcc02412 | RCAP_rcc02408 | KHG/KDPG aldolase. | Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone. | 0.952 |
edd | eda | RCAP_rcc02411 | RCAP_rcc02412 | Phosphogluconate dehydratase; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family. | KHG/KDPG aldolase. | 0.999 |
edd | fruB | RCAP_rcc02411 | RCAP_rcc02543 | Phosphogluconate dehydratase; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family. | Multiphosphoryl transfer protein. | 0.406 |
edd | glk | RCAP_rcc02411 | RCAP_rcc01768 | Phosphogluconate dehydratase; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family. | Glucokinase; Belongs to the bacterial glucokinase family. | 0.943 |
edd | pgi | RCAP_rcc02411 | RCAP_rcc02406 | Phosphogluconate dehydratase; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.635 |
edd | pgl | RCAP_rcc02411 | RCAP_rcc02407 | Phosphogluconate dehydratase; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family. | 6-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate. | 0.994 |
edd | zwf | RCAP_rcc02411 | RCAP_rcc02408 | Phosphogluconate dehydratase; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family. | Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone. | 0.975 |
fruB | edd | RCAP_rcc02543 | RCAP_rcc02411 | Multiphosphoryl transfer protein. | Phosphogluconate dehydratase; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family. | 0.406 |
fruB | glk | RCAP_rcc02543 | RCAP_rcc01768 | Multiphosphoryl transfer protein. | Glucokinase; Belongs to the bacterial glucokinase family. | 0.459 |
fruB | nagA | RCAP_rcc02543 | RCAP_rcc03444 | Multiphosphoryl transfer protein. | N-acetylglucosamine-6-phosphate deacetylase. | 0.659 |
fruB | pgi | RCAP_rcc02543 | RCAP_rcc02406 | Multiphosphoryl transfer protein. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.704 |
fruB | pgl | RCAP_rcc02543 | RCAP_rcc02407 | Multiphosphoryl transfer protein. | 6-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate. | 0.668 |
fruB | sucC | RCAP_rcc02543 | RCAP_rcc00720 | Multiphosphoryl transfer protein. | succinyl-CoA synthetase (ADP-forming), beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | 0.446 |
fruB | zwf | RCAP_rcc02543 | RCAP_rcc02408 | Multiphosphoryl transfer protein. | Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone. | 0.416 |
glk | eda | RCAP_rcc01768 | RCAP_rcc02412 | Glucokinase; Belongs to the bacterial glucokinase family. | KHG/KDPG aldolase. | 0.982 |
glk | edd | RCAP_rcc01768 | RCAP_rcc02411 | Glucokinase; Belongs to the bacterial glucokinase family. | Phosphogluconate dehydratase; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family. | 0.943 |
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