STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADE86203.1TonB-dependent receptor plug domain protein. (853 aa)    
Predicted Functional Partners:
tonB
Protein TonB.
 
 
 0.764
tolA
TolA protein.
  
 
 0.717
ADE85934.1
Conserved hypothetical protein.
  
     0.652
bsaA2
Glutathione peroxidase-2; Belongs to the glutathione peroxidase family.
       0.608
ADE86204.1
Conserved hypothetical protein.
  
  
 0.601
ADE84128.1
Protein of unknown function DUF1706.
  
     0.600
ADE85090.1
Iron siderophore/cobalamin ABC transporter, periplasmic iron siderophore/cobalamin-binding protein.
 
  
 0.564
ADE85930.1
Conserved hypothetical protein.
  
     0.541
ADE85218.1
Transcriptional regulator, AraC family.
  
   
 0.533
cowN
Conserved hypothetical protein; Is required to sustain N(2)-dependent growth in the presence of low levels of carbon monoxide (CO). Probably acts by protecting the N(2) fixation ability of the nitrogenase complex, which is inactivated in the presence of CO.
  
     0.509
Your Current Organism:
Rhodobacter capsulatus
NCBI taxonomy Id: 272942
Other names: R. capsulatus SB 1003, Rhodobacter capsulatus SB 1003
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