STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amaBN-carbamoyl-L-amino acid amidohydrolase. (416 aa)    
Predicted Functional Partners:
dht
Dihydropyrimidinase.
 
 
 0.996
ADE86258.1
Dihydropyrimidine dehydrogenase (NADP(+)).
 
 0.940
ADE86259.1
Pyridine nucleotide-disulfide oxidoreductase family protein.
 
 
  0.900
ADE84047.1
Aldehyde dehydrogenase family protein.
    
 0.804
ADE84309.1
Aldehyde dehydrogenase family protein.
    
 0.804
ADE85215.1
L-aminoadipate-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
    
 0.804
aldH1
Aldehyde dehydrogenase-1 (NAD(+)); Belongs to the aldehyde dehydrogenase family.
    
 0.804
ADE86254.1
Pyrimidine ABC transporter, ATP-binding protein.
 
     0.710
ADE86251.1
Pyrimidine ABC transporter, periplasmic pyrimidine-binding protein.
 
  
 0.706
ADE86253.1
Pyrimidine ABC transporter, permease protein.
 
     0.632
Your Current Organism:
Rhodobacter capsulatus
NCBI taxonomy Id: 272942
Other names: R. capsulatus SB 1003, Rhodobacter capsulatus SB 1003
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