STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
putRProline dehydrogenase transcriptional activator. (154 aa)    
Predicted Functional Partners:
putA
Bifunctional protein PutA; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
     
 0.934
selD
Selenide, water dikinase; Synthesizes selenophosphate from selenide and ATP.
      
 0.724
ADE84259.1
Transcriptional regulator, AsnC/Lrp family.
  
     0.703
ftsK
Cell division protein FtsK.
     
 0.612
ilvE1
Branched-chain-amino-acid transaminase-1; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
      
 0.581
ntrX
Nitrogen assimilation regulatory protein NtrX.
      
 0.576
gst
Glutathione S-transferase; Belongs to the GST superfamily.
      
 0.491
ctrA
Cell cycle transcriptional regulator CtrA.
   
  
 0.441
ntrY
Nitrogen regulation protein NtrY.
      
 0.420
ADE86376.1
Protein of unknown function DUF461.
       0.417
Your Current Organism:
Rhodobacter capsulatus
NCBI taxonomy Id: 272942
Other names: R. capsulatus SB 1003, Rhodobacter capsulatus SB 1003
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