STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADE86392.1Class II aldolase/adducin, N-terminal domain / oxidoreductase, short-chain dehydrogenase/reductase family. (677 aa)    
Predicted Functional Partners:
ADE86393.1
Transcriptional regulator, DeoR family.
 
     0.681
ADE86168.1
AMP-dependent synthetase and ligase family protein.
  
 
 0.673
ADE86163.1
Conserved hypothetical protein.
  
 
 0.664
betC
Choline-sulfatase.
  
 
 0.627
ADE86613.1
Carbohydrate kinase, FGGY family.
 
  
 0.575
ADE86391.1
Transcriptional regulator, DeoR family.
  
  
 0.573
xylB
Xylulokinase.
  
  
 0.514
fabD
[acyl-carrier-protein] S-malonyltransferase.
  
 
 0.483
ADE86166.1
Phosphopantetheine-binding domain protein.
  
 
 0.450
araB
Ribulokinase.
     
 0.440
Your Current Organism:
Rhodobacter capsulatus
NCBI taxonomy Id: 272942
Other names: R. capsulatus SB 1003, Rhodobacter capsulatus SB 1003
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