STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADE86433.1Conserved hypothetical protein. (115 aa)    
Predicted Functional Partners:
ADE85407.1
Protein of unknown function DUF1153.
  
     0.733
ADE87049.1
Hemimethylated DNA-binding protein family.
 
     0.703
ADE85413.1
Conserved hypothetical protein.
  
     0.691
ADE83881.1
OstA family protein.
  
     0.585
ADE86434.1
NLP/P60 family protein.
  
     0.564
ADE86794.1
Protein of unknown function DUF1052.
  
     0.559
ispZ
Intracellular septation protein A; Involved in cell division; probably involved in intracellular septation; Belongs to the YciB family.
 
     0.558
regB
Sensor histidine kinase RegB.
  
     0.542
ADE85901.1
Protein of unknown function DUF1476.
  
     0.540
dcd
Deoxycytidine triphosphate deaminase.
  
     0.522
Your Current Organism:
Rhodobacter capsulatus
NCBI taxonomy Id: 272942
Other names: R. capsulatus SB 1003, Rhodobacter capsulatus SB 1003
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.