STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADE86982.1cytoChrome c biogenesis protein, transmembrane region. (612 aa)    
Predicted Functional Partners:
msrA1
peptide-methionine-(S)-S-oxide reductase-1; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
 
 
 0.965
msrB1
Peptide-methionine (R)-S-oxide reductase-1.
  
 0.924
ccmC
Heme exporter protein C; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmC/CycZ/HelC family.
  
  
 0.889
msrA2
peptide-methionine-(S)-S-oxide reductase-2; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
   
 0.841
trxB
Thioredoxin-disulfide reductase.
  
 
 0.731
senC
Electron transport protein SenC; Involved in both aerobic respiration and photosynthesis gene expression.
  
 
 0.722
ccmF
Cytochrome c-type biogenesis protein CcmF; Required for the biogenesis of c-type cytochromes. Possible subunit of a heme lyase; Belongs to the CcmF/CycK/Ccl1/NrfE/CcsA family.
  
  
 0.699
hemL
Glutamate-1-semialdehyde 2,1-aminomutase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
  
 0.696
msrB2
Peptide-methionine (R)-S-oxide reductase-2.
  
 0.677
ADE86168.1
AMP-dependent synthetase and ligase family protein.
   
 
 0.671
Your Current Organism:
Rhodobacter capsulatus
NCBI taxonomy Id: 272942
Other names: R. capsulatus SB 1003, Rhodobacter capsulatus SB 1003
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.