STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
emrBMultidrug resistance protein B; Belongs to the major facilitator superfamily. (519 aa)    
Predicted Functional Partners:
emrA
Multidrug resistance protein A.
 
 
 0.997
ADE87107.1
Transcriptional regulator, MarR family.
 
   
 0.911
macB
Macrolide export ABC transporter, ATP-binding/permease protein MacB; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP- binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
  
  
 0.854
acrA
Acriflavine resistance protein A; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  
 0.842
baeR
Transcriptional regulatory protein BaeR.
      
 0.742
ADE84379.1
RND efflux system, outer membrane lipoprotein, NodT family.
 
  
 0.597
sseA
3-mercaptopyruvate sulfurtransferase.
       0.507
tyrB
Aromatic-amino-acid aminotransferase.
       0.507
ADE83776.1
Secretion protein, HlyD family.
 
 
 0.448
ADE86168.1
AMP-dependent synthetase and ligase family protein.
  
  
 0.425
Your Current Organism:
Rhodobacter capsulatus
NCBI taxonomy Id: 272942
Other names: R. capsulatus SB 1003, Rhodobacter capsulatus SB 1003
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.