Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ADE86440.1 | ADE87141.1 | RCAP_rcc02710 | RCAP_rcc03417 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.415 |
ADE87138.1 | ADE87140.1 | RCAP_rcc03414 | RCAP_rcc03416 | Protein of unknown function DUF482. | Endoribonuclease L-PSP family protein. | 0.755 |
ADE87138.1 | ADE87141.1 | RCAP_rcc03414 | RCAP_rcc03417 | Protein of unknown function DUF482. | Conserved hypothetical protein. | 0.628 |
ADE87138.1 | smc | RCAP_rcc03414 | RCAP_rcc03418 | Protein of unknown function DUF482. | Chromosome partition protein Smc; Required for chromosome condensation and partitioning. Belongs to the SMC family. | 0.502 |
ADE87138.1 | ugpQ | RCAP_rcc03414 | RCAP_rcc03415 | Protein of unknown function DUF482. | Glycerophosphoryl diester phosphodiesterase. | 0.755 |
ADE87140.1 | ADE87138.1 | RCAP_rcc03416 | RCAP_rcc03414 | Endoribonuclease L-PSP family protein. | Protein of unknown function DUF482. | 0.755 |
ADE87140.1 | ADE87141.1 | RCAP_rcc03416 | RCAP_rcc03417 | Endoribonuclease L-PSP family protein. | Conserved hypothetical protein. | 0.786 |
ADE87140.1 | smc | RCAP_rcc03416 | RCAP_rcc03418 | Endoribonuclease L-PSP family protein. | Chromosome partition protein Smc; Required for chromosome condensation and partitioning. Belongs to the SMC family. | 0.615 |
ADE87140.1 | ugpQ | RCAP_rcc03416 | RCAP_rcc03415 | Endoribonuclease L-PSP family protein. | Glycerophosphoryl diester phosphodiesterase. | 0.853 |
ADE87141.1 | ADE86440.1 | RCAP_rcc03417 | RCAP_rcc02710 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.415 |
ADE87141.1 | ADE87138.1 | RCAP_rcc03417 | RCAP_rcc03414 | Conserved hypothetical protein. | Protein of unknown function DUF482. | 0.628 |
ADE87141.1 | ADE87140.1 | RCAP_rcc03417 | RCAP_rcc03416 | Conserved hypothetical protein. | Endoribonuclease L-PSP family protein. | 0.786 |
ADE87141.1 | bglX | RCAP_rcc03417 | RCAP_rcc02421 | Conserved hypothetical protein. | Periplasmic beta-glucosidase. | 0.453 |
ADE87141.1 | nagZ | RCAP_rcc03417 | RCAP_rcc00856 | Conserved hypothetical protein. | beta-N-acetylhexosaminidase. | 0.516 |
ADE87141.1 | polA | RCAP_rcc03417 | RCAP_rcc02480 | Conserved hypothetical protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.494 |
ADE87141.1 | rbfA | RCAP_rcc03417 | RCAP_rcc00276 | Conserved hypothetical protein. | Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA. | 0.483 |
ADE87141.1 | smc | RCAP_rcc03417 | RCAP_rcc03418 | Conserved hypothetical protein. | Chromosome partition protein Smc; Required for chromosome condensation and partitioning. Belongs to the SMC family. | 0.667 |
ADE87141.1 | tolB | RCAP_rcc03417 | RCAP_rcc03196 | Conserved hypothetical protein. | TolB protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. | 0.464 |
ADE87141.1 | ugpQ | RCAP_rcc03417 | RCAP_rcc03415 | Conserved hypothetical protein. | Glycerophosphoryl diester phosphodiesterase. | 0.821 |
bglX | ADE87141.1 | RCAP_rcc02421 | RCAP_rcc03417 | Periplasmic beta-glucosidase. | Conserved hypothetical protein. | 0.453 |
page 1 of 2