STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADE87162.1Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. (301 aa)    
Predicted Functional Partners:
ADE85311.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.657
ADE85088.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.588
cbbO
Rubisco activation protein CbbO.
      
 0.579
flgK
Flagellar hook-associated protein FlgK; Belongs to the flagella basal body rod proteins family.
      
 0.572
fadH
2,4-dienoyl-CoA reductase (NADPH).
 
 
 
 0.553
cbbS
Ribulose bisphosphate carboxylase, small subunit.
      
 0.528
cbbQ
CbbQ protein.
   
  
 0.512
gltB
Glutamate synthase (NADPH), alpha subunit.
  
  
 0.504
ADE84320.1
Protein of unknown function DUF847.
  
     0.487
cbbL
Ribulose bisphosphate carboxylase, large subunit; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO large chain family. Type I subfamily.
     
 0.451
Your Current Organism:
Rhodobacter capsulatus
NCBI taxonomy Id: 272942
Other names: R. capsulatus SB 1003, Rhodobacter capsulatus SB 1003
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.