STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSP_0003Putative site-specific recombinase; IMG reference gene:2512954986; PFAM: Recombinase; Resolvase, N terminal domain; extended by 73 aa on 3' end due to sequence change. (582 aa)    
Predicted Functional Partners:
gpU
Putative phage tail protein U; IMG reference gene:2512956866; PFAM: Phage P2 GpU; extended by 10 aa.
   
    0.793
RSP_3353
IMG reference gene:2512956863; PFAM: Phage tail protein E.
   
    0.685
spbB
Histone-like nucleoid-structuring protein H-NS; IMG reference gene:2512954985; PFAM: H-NS histone family.
       0.608
RSP_2358
IMG reference gene:2512954299; PFAM: Caudovirus prohead protease; Phage capsid family; TIGRFAM: phage major capsid protein, HK97 family; phage prohead protease, HK97 family; extended by 111 aa.
  
    0.586
RSP_3608
Site-specific recombinase, DNA invertase Pin; IMG reference gene:2512957123; PFAM: Recombinase; Resolvase, N terminal domain.
  
    0.584
RSP_1968
Putative integrase/recombinase; IMG reference gene:2512953881; PFAM: Phage integrase family.
 
  
 0.499
RSP_2761
IMG reference gene:2512954708; PFAM: Phage Tail Protein X.
   
    0.496
gpX
IMG reference gene:2512956867; PFAM: Phage Tail Protein X.
   
    0.486
RSP_0860
Hypothetical protein; IMG reference gene:2512955891.
   
    0.457
gpD
Phage tail protein D; IMG reference gene:2512956868; PFAM: Phage late control gene D protein (GPD).
   
  
 0.406
Your Current Organism:
Rhodobacter sphaeroides 241
NCBI taxonomy Id: 272943
Other names: R. sphaeroides 2.4.1, Rhodobacter sphaeroides 2.4.1, Rhodobacter sphaeroides ATCC 17023, Rhodobacter sphaeroides ATH 2.4.1, Rhodobacter sphaeroides str. 2.4.1, Rhodobacter sphaeroides strain 2.4.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.