STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSP_0084Hypothetical protein; IMG reference gene:2512955074. (388 aa)    
Predicted Functional Partners:
motB1
Putative chemotaxis MotB protein; IMG reference gene:2512956348; PFAM: OmpA family; truncated by 7 aa.
      
 0.814
RSP_1330
Putative flagellar basal-body rod protein FlgC; IMG reference gene:2512956376; PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgC; flagellar basal-body rod protein FlgB; Belongs to the flagella basal body rod proteins family.
      
 0.814
flgL
Flagellar hook-associated protein 3 FlgL; IMG reference gene:2512955063; PFAM: Bacterial flagellin N-terminal helical region; Bacterial flagellin C-terminal helical region; TIGRFAM: flagellar hook-associated protein 3.
  
    0.766
fliA
RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG; IMG reference gene:2512955016; PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, FliA/WhiG family; RNA polymerase sigma factor, sigma-70 family.
   
  
 0.763
flgC
Flagellar basal-body rod protein FlgC; IMG reference gene:2512955072; PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
  
    0.678
flgB
Flagellar proximal rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body (By similarity).
  
    0.678
flgF
Flagellar proximal rod protein FlgF; IMG reference gene:2512955069; PFAM: Domain of unknown function (DUF1078); TIGRFAM: fagellar hook-basal body proteins.
  
    0.651
flgD
Flagellar scaffolding protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein.
  
    0.627
RSP_1582
Putative sulfate transporter/antisigma-factor antagonist; IMG reference gene:2512953478.
   
  
 0.620
cheB2
Chemotaxis methylesterase, CheB2; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
   
    0.614
Your Current Organism:
Rhodobacter sphaeroides 241
NCBI taxonomy Id: 272943
Other names: R. sphaeroides 2.4.1, Rhodobacter sphaeroides 2.4.1, Rhodobacter sphaeroides ATCC 17023, Rhodobacter sphaeroides ATH 2.4.1, Rhodobacter sphaeroides str. 2.4.1, Rhodobacter sphaeroides strain 2.4.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.