STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSP_0151Putative metallopeptidase (DUF2201); IMG reference gene:2512955148; PFAM: Predicted metallopeptidase (DUF2201). (436 aa)    
Predicted Functional Partners:
RSP_0152
P-loop ATPase; IMG reference gene:2512955147; PFAM: ATPase family associated with various cellular activities (AAA); truncated by 7 aa.
 
    0.962
bchJ
Bacteriochlorophyll synthase, 23 kDa subunit (bchJ); IMG reference gene:2512955287; PFAM: V4R domain; TIGRFAM: bacteriochlorophyll 4-vinyl reductase.
  
     0.730
RSP_0477
Putative hydrolase of the alpha/beta-hydrolase fold protein; IMG reference gene:2512955489.
  
     0.599
bchE
Anaerobic Mg-protoporphyrin IX monomethyl ester oxidative cyclase; Involved in the tetrapyrrole biosynthetic pathways leading to chlorophyll and bacteriochlorophyll (BChl). Catalyzes the anaerobic formation of the isocyclic ring (E-ring) in Mg-protoporphyrin monomethyl ester (MPE) to yield protochlorophyllide a (PChlide a) via a six-electron oxidation and the formation of an oxo group at position C13 using oxygen from a water molecule.
  
     0.551
RSP_0512
PAS/PAC sensor hybrid histidine kinase; IMG reference gene:2512955524; PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box.
  
    0.535
RSP_2469
Hypothetical protein; IMG reference gene:2512954411.
  
    0.447
RSP_3508
IMG reference gene:2512957019; PFAM: Acetamidase/Formamidase family.
  
     0.434
RSP_0432
Yip1 domain-containing protein; IMG reference gene:2512955446; PFAM: Yip1 domain.
  
     0.432
RSP_6117
Rhodanese-related sulfurtransferase; IMG reference gene:2512955522; PFAM: Rhodanese-like domain.
  
     0.411
Your Current Organism:
Rhodobacter sphaeroides 241
NCBI taxonomy Id: 272943
Other names: R. sphaeroides 2.4.1, Rhodobacter sphaeroides 2.4.1, Rhodobacter sphaeroides ATCC 17023, Rhodobacter sphaeroides ATH 2.4.1, Rhodobacter sphaeroides str. 2.4.1, Rhodobacter sphaeroides strain 2.4.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.