STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSP_0170Hypothetical protein; IMG reference gene:2512955168. (96 aa)    
Predicted Functional Partners:
RSP_0169
Na+/solute symporter; IMG reference gene:2512955167; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain.
 
    0.971
RSP_0171
IMG reference gene:2512955169; PFAM: Response regulator receiver domain.
  
    0.835
RSP_0172
Putative transcriptional regulators; IMG reference gene:2512955170; PFAM: Helix-turn-helix; Predicted transcriptional regulator (DUF2083).
 
     0.757
RSP_6099
Putative flagellar switch protein FliM; IMG reference gene:2512955166; PFAM: Surface presentation of antigens (SPOA).
 
     0.751
RSP_2644
Hypothetical protein; IMG reference gene:2512954587.
  
    0.711
RSP_7557
Hypothetical protein; IMG reference gene:2512955374; new gene; replaced RSP_0365 on the opposite strand.
  
     0.706
RSP_1900
Flp pilus assembly protein, protease CpaA; IMG reference gene:2512953809; PFAM: Type IV leader peptidase family.
  
     0.700
RSP_6025
Hypothetical protein; IMG reference gene:2512953820; truncated by 29 aa.
  
     0.665
RSP_0549
Sporulation and cell division-related protein; IMG reference gene:2512955562; PFAM: Sporulation related domain.
  
    0.660
RSP_1855
Trypsin-like serine protease with C-terminal PDZ domain; IMG reference gene:2512953764; PFAM: Putative peptidoglycan binding domain; Sporulation related domain.
  
     0.620
Your Current Organism:
Rhodobacter sphaeroides 241
NCBI taxonomy Id: 272943
Other names: R. sphaeroides 2.4.1, Rhodobacter sphaeroides 2.4.1, Rhodobacter sphaeroides ATCC 17023, Rhodobacter sphaeroides ATH 2.4.1, Rhodobacter sphaeroides str. 2.4.1, Rhodobacter sphaeroides strain 2.4.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.