STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSP_0180ABC nitrate/sulfonate/bicarbonate transporter, inner membrane subunit; IMG reference gene:2512955177; PFAM: Binding-protein-dependent transport system inner membrane component. (283 aa)    
Predicted Functional Partners:
RSP_0179
ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components TauA; IMG reference gene:2512955176; PFAM: NMT1/THI5 like.
 
 
 0.995
RSP_0181
ABC nitrate/sulfonate/bicarbonate transporter, inner membrane subunit; IMG reference gene:2512955178; PFAM: Binding-protein-dependent transport system inner membrane component.
 
  
 
0.984
RSP_3167
ABC transporter, ATPase subunit; IMG reference gene:2512956677; PFAM: ABC transporter.
  
 0.840
RSP_0646
ABC transporter, substrate-binding protein; IMG reference gene:2512955665; PFAM: NMT1/THI5 like.
  
 0.802
RSP_2596
ABC transporter, ATPase subunit; IMG reference gene:2512954539; PFAM: ABC transporter.
  
 0.730
RSP_0940
ABC transporter, periplasmic substrate binding protein; IMG reference gene:2512955975; PFAM: NMT1/THI5 like.
 
  
 0.687
RSP_0941
ABC transporter, ATPase subunit; IMG reference gene:2512955976; PFAM: ABC transporter.
  
 0.675
RSP_3154
ABC nitrate/sulfonate/bicarbonate transporter family, ATPase subunit; IMG reference gene:2512956663; PFAM: ABC transporter; truncated by 18 aa.
  
 0.646
RSP_3153
ABC nitrate/sulfonate/bicarbonate transporter family, inner membrane subunit; IMG reference gene:2512956662; PFAM: Binding-protein-dependent transport system inner membrane component.
 
     0.610
RSP_0645
ABC transporter, ATPase subunit; IMG reference gene:2512955664; PFAM: ABC transporter.
  
 0.595
Your Current Organism:
Rhodobacter sphaeroides 241
NCBI taxonomy Id: 272943
Other names: R. sphaeroides 2.4.1, Rhodobacter sphaeroides 2.4.1, Rhodobacter sphaeroides ATCC 17023, Rhodobacter sphaeroides ATH 2.4.1, Rhodobacter sphaeroides str. 2.4.1, Rhodobacter sphaeroides strain 2.4.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.