Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| PntB | RSP_0238 | RSP_0239 | RSP_0238 | Pyridine nucleotide transhydrogenase beta subunit; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the PNT beta subunit family. | Putative membrane-anchored protein; IMG reference gene:2512955244; PFAM: Protein of unknown function (DUF3422). | 0.533 |
| PntB | RSP_0241 | RSP_0239 | RSP_0241 | Pyridine nucleotide transhydrogenase beta subunit; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the PNT beta subunit family. | Putative protein-S-isoprenylcysteine methyltransferase; IMG reference gene:2512955247; truncated by 28 aa. | 0.636 |
| PntB | RSP_0708 | RSP_0239 | RSP_0708 | Pyridine nucleotide transhydrogenase beta subunit; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the PNT beta subunit family. | NUDIX hydrolase; IMG reference gene:2512955729; PFAM: NADH pyrophosphatase zinc ribbon domain; NUDIX domain; NADH pyrophosphatase-like rudimentary NUDIX domain. | 0.900 |
| PntB | RSP_2912 | RSP_0239 | RSP_2912 | Pyridine nucleotide transhydrogenase beta subunit; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the PNT beta subunit family. | Putative pyrophosphatase; IMG reference gene:2512954874; PFAM: MazG nucleotide pyrophosphohydrolase domain; TIGRFAM: MazG family protein. | 0.903 |
| PntB | ald | RSP_0239 | RSP_0723 | Pyridine nucleotide transhydrogenase beta subunit; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the PNT beta subunit family. | Alanine dehydrogenase; IMG reference gene:2512955745; PFAM: Alanine dehydrogenase/PNT, C-terminal domain; Alanine dehydrogenase/PNT, N-terminal domain; TIGRFAM: alanine dehydrogenase; Belongs to the AlaDH/PNT family. | 0.911 |
| PntB | cobB-2 | RSP_0239 | RSP_3226 | Pyridine nucleotide transhydrogenase beta subunit; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the PNT beta subunit family. | NAD-dependent deacetylase; IMG reference gene:2512956737; PFAM: Sir2 family; Belongs to the sirtuin family. Class III subfamily. | 0.902 |
| PntB | nadD | RSP_0239 | RSP_0586 | Pyridine nucleotide transhydrogenase beta subunit; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the PNT beta subunit family. | Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.904 |
| PntB | nadE | RSP_0239 | RSP_2333 | Pyridine nucleotide transhydrogenase beta subunit; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the PNT beta subunit family. | NAD(+) synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.932 |
| PntB | pntA | RSP_0239 | RSP_0240 | Pyridine nucleotide transhydrogenase beta subunit; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the PNT beta subunit family. | NAD(P) transhydrogenase subunit alpha; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane. | 0.999 |
| PntB | ppnk | RSP_0239 | RSP_0825 | Pyridine nucleotide transhydrogenase beta subunit; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the PNT beta subunit family. | Putative inorganic polyphosphate/ATP-NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.909 |
| RSP_0238 | PntB | RSP_0238 | RSP_0239 | Putative membrane-anchored protein; IMG reference gene:2512955244; PFAM: Protein of unknown function (DUF3422). | Pyridine nucleotide transhydrogenase beta subunit; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the PNT beta subunit family. | 0.533 |
| RSP_0238 | pntA | RSP_0238 | RSP_0240 | Putative membrane-anchored protein; IMG reference gene:2512955244; PFAM: Protein of unknown function (DUF3422). | NAD(P) transhydrogenase subunit alpha; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane. | 0.528 |
| RSP_0241 | PntB | RSP_0241 | RSP_0239 | Putative protein-S-isoprenylcysteine methyltransferase; IMG reference gene:2512955247; truncated by 28 aa. | Pyridine nucleotide transhydrogenase beta subunit; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the PNT beta subunit family. | 0.636 |
| RSP_0241 | pntA | RSP_0241 | RSP_0240 | Putative protein-S-isoprenylcysteine methyltransferase; IMG reference gene:2512955247; truncated by 28 aa. | NAD(P) transhydrogenase subunit alpha; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane. | 0.647 |
| RSP_0708 | PntB | RSP_0708 | RSP_0239 | NUDIX hydrolase; IMG reference gene:2512955729; PFAM: NADH pyrophosphatase zinc ribbon domain; NUDIX domain; NADH pyrophosphatase-like rudimentary NUDIX domain. | Pyridine nucleotide transhydrogenase beta subunit; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the PNT beta subunit family. | 0.900 |
| RSP_0708 | RSP_2912 | RSP_0708 | RSP_2912 | NUDIX hydrolase; IMG reference gene:2512955729; PFAM: NADH pyrophosphatase zinc ribbon domain; NUDIX domain; NADH pyrophosphatase-like rudimentary NUDIX domain. | Putative pyrophosphatase; IMG reference gene:2512954874; PFAM: MazG nucleotide pyrophosphohydrolase domain; TIGRFAM: MazG family protein. | 0.919 |
| RSP_0708 | cobB-2 | RSP_0708 | RSP_3226 | NUDIX hydrolase; IMG reference gene:2512955729; PFAM: NADH pyrophosphatase zinc ribbon domain; NUDIX domain; NADH pyrophosphatase-like rudimentary NUDIX domain. | NAD-dependent deacetylase; IMG reference gene:2512956737; PFAM: Sir2 family; Belongs to the sirtuin family. Class III subfamily. | 0.909 |
| RSP_0708 | nadD | RSP_0708 | RSP_0586 | NUDIX hydrolase; IMG reference gene:2512955729; PFAM: NADH pyrophosphatase zinc ribbon domain; NUDIX domain; NADH pyrophosphatase-like rudimentary NUDIX domain. | Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.909 |
| RSP_0708 | nadE | RSP_0708 | RSP_2333 | NUDIX hydrolase; IMG reference gene:2512955729; PFAM: NADH pyrophosphatase zinc ribbon domain; NUDIX domain; NADH pyrophosphatase-like rudimentary NUDIX domain. | NAD(+) synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.915 |
| RSP_0708 | pntA | RSP_0708 | RSP_0240 | NUDIX hydrolase; IMG reference gene:2512955729; PFAM: NADH pyrophosphatase zinc ribbon domain; NUDIX domain; NADH pyrophosphatase-like rudimentary NUDIX domain. | NAD(P) transhydrogenase subunit alpha; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane. | 0.900 |
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