STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSP_0246ABC lipid efflux transporter, fused ATPase and inner membrane subunits; IMG reference gene:2512955252; PFAM: ABC transporter transmembrane region; ABC transporter. (590 aa)    
Predicted Functional Partners:
RSP_0247
IMG reference gene:2512955253; PFAM: Aminomethyltransferase folate-binding domain; TIGRFAM: folate-binding protein YgfZ.
  
    0.800
RSP_0349
ABC transporter, ATPase subunit; IMG reference gene:2512955359; PFAM: ABC transporter; TOBE domain.
 
   
0.767
RSP_2586
ABC multidrug efflux transporter, ATPase subunit; IMG reference gene:2512954529; PFAM: ABC transporter; TIGRFAM: ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system.
 
0.754
argB
N-acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.
 
 
  
 0.642
RSP_2696
ABC transporter, fused ATPase and inner membrane subunits; IMG reference gene:2512954640; PFAM: ABC transporter transmembrane region; ABC transporter.
  
0.595
glk
Putative glucokinase; IMG reference gene:2512954837; PFAM: Glucokinase; TIGRFAM: glucokinase, proteobacterial type; Belongs to the bacterial glucokinase family.
   
    0.577
RSP_1478
IMG reference gene:2512953371; PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; Belongs to the ABC transporter superfamily.
 
     
0.569
RSP_0245
Serine-pyruvate aminotransferase/aspartate aminotransferase; IMG reference gene:2512955251; PFAM: Aminotransferase class-V.
  
    0.562
dnaK
Heat shock protein (Hsp70, DnaK); Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.559
RSP_2900
Putative permease; IMG reference gene:2512954862; PFAM: Predicted permease YjgP/YjgQ family.
 
    0.551
Your Current Organism:
Rhodobacter sphaeroides 241
NCBI taxonomy Id: 272943
Other names: R. sphaeroides 2.4.1, Rhodobacter sphaeroides 2.4.1, Rhodobacter sphaeroides ATCC 17023, Rhodobacter sphaeroides ATH 2.4.1, Rhodobacter sphaeroides str. 2.4.1, Rhodobacter sphaeroides strain 2.4.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.