STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSP_0298IMG reference gene:2512955306; PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter; TIGRFAM: urea ABC transporter, ATP-binding protein UrtD. (247 aa)    
Predicted Functional Partners:
RSP_0299
Amino acid/amide ABC transporter membrane protein 2, HAAT family; IMG reference gene:2512955307; PFAM: Branched-chain amino acid transport system / permease component; TIGRFAM: urea ABC transporter, permease protein UrtC; Belongs to the binding-protein-dependent transport system permease family.
 
 0.998
RSP_0297
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family; IMG reference gene:2512955305; PFAM: ABC transporter; TIGRFAM: urea ABC transporter, ATP-binding protein UrtE.
 
0.996
RSP_0300
Amino acid/amide ABC transporter membrane protein 1, HAAT family; IMG reference gene:2512955308; PFAM: Branched-chain amino acid transport system / permease component; TIGRFAM: urea ABC transporter, permease protein UrtB; Belongs to the binding-protein-dependent transport system permease family.
 
 0.986
RSP_0301
Amino acid/amide ABC transporter substrate-binding protein, HAAT family; IMG reference gene:2512955309; TIGRFAM: urea ABC transporter, urea binding protein.
 
 
 0.977
RSP_1289
Amino acid/amide ABC transporter membrane protein 2, HAAT family; IMG reference gene:2512956334; PFAM: Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family.
  
 0.968
RSP_3293
Amino acid/amide ABC transporter membrane protein 2, HAAT family; IMG reference gene:2512956798; PFAM: Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family.
  
 0.948
RSP_2925
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family; IMG reference gene:2512954888; PFAM: ABC transporter.
  
0.920
RSP_1287
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family; IMG reference gene:2512956332; PFAM: ABC transporter.
  
0.918
RSP_2276
Amino acid/amide ABC transporter membrane protein 2, HAAT family; IMG reference gene:2512954209; PFAM: Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family.
  
 0.917
RSP_3295
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family; IMG reference gene:2512956800; PFAM: ABC transporter.
  
0.837
Your Current Organism:
Rhodobacter sphaeroides 241
NCBI taxonomy Id: 272943
Other names: R. sphaeroides 2.4.1, Rhodobacter sphaeroides 2.4.1, Rhodobacter sphaeroides ATCC 17023, Rhodobacter sphaeroides ATH 2.4.1, Rhodobacter sphaeroides str. 2.4.1, Rhodobacter sphaeroides strain 2.4.1
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