STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSP_0351D-threo-aldose 1-dehydrogenase; IMG reference gene:2512955361; PFAM: Aldo/keto reductase family. (341 aa)    
Predicted Functional Partners:
RSP_2257
Putative Fructokinase; IMG reference gene:2512954186; PFAM: pfkB family carbohydrate kinase; Belongs to the carbohydrate kinase PfkB family.
    
  0.810
aqpZ
IMG reference gene:2512954732; PFAM: Major intrinsic protein; TIGRFAM: MIP family channel proteins; Belongs to the MIP/aquaporin (TC 1.A.8) family.
   
 
 0.659
RSP_0350
Hypothetical protein; IMG reference gene:2512955360.
  
    0.636
RSP_2314
Oxidoreductase, Chromogranin/secretogranin; IMG reference gene:2512954248; PFAM: Aldo/keto reductase family.
  
 
 0.631
RSP_3492
Protein phosphatase 2C; IMG reference gene:2512957002; PFAM: Protein phosphatase 2C.
   
   0.566
RSP_4042
Peptidyl-prolyl cis-trans isomerase, cyclophilin type; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
   0.534
RSP_4043
Peptidylprolyl isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
   0.534
RSP_1978
Molecular chaperone, DnaJ family; IMG reference gene:2512953894; PFAM: DnaJ domain.
   
   0.509
RSP_0349
ABC transporter, ATPase subunit; IMG reference gene:2512955359; PFAM: ABC transporter; TOBE domain.
  
    0.504
dnaJ
Chaperone, DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and [...]
    
   0.504
Your Current Organism:
Rhodobacter sphaeroides 241
NCBI taxonomy Id: 272943
Other names: R. sphaeroides 2.4.1, Rhodobacter sphaeroides 2.4.1, Rhodobacter sphaeroides ATCC 17023, Rhodobacter sphaeroides ATH 2.4.1, Rhodobacter sphaeroides str. 2.4.1, Rhodobacter sphaeroides strain 2.4.1
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.