STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSP_0370Hypothetical protein; IMG reference gene:2512955380; PFAM: Tellurite resistance protein TerB. (145 aa)    
Predicted Functional Partners:
rlmJ
Protein involved in catabolism of external DNA; Specifically methylates the adenine in position 2030 of 23S rRNA.
       0.647
pyrG
CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.
       0.483
mucS
Transcriptional regulator, MarR family; IMG reference gene:2512955790; truncated by 4 aa.
  
     0.482
RSP_0371
Amino acid ABC transporter ATP-binding protein, PAAT family; IMG reference gene:2512955381; PFAM: ABC transporter.
       0.477
RSP_0373
Amino acid ABC transporter membrane protein 1, PAAT family; IMG reference gene:2512955383; PFAM: Binding-protein-dependent transport system inner membrane component.
       0.451
RSP_2972
Hypothetical protein; IMG reference gene:2512954938.
  
     0.429
RSP_0372
Amino acid ABC transporter substrate-binding protein, PAAT family; IMG reference gene:2512955382; PFAM: Bacterial extracellular solute-binding proteins, family 3.
       0.425
RSP_0367
Protein translocase subunit secG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.
 
     0.408
Your Current Organism:
Rhodobacter sphaeroides 241
NCBI taxonomy Id: 272943
Other names: R. sphaeroides 2.4.1, Rhodobacter sphaeroides 2.4.1, Rhodobacter sphaeroides ATCC 17023, Rhodobacter sphaeroides ATH 2.4.1, Rhodobacter sphaeroides str. 2.4.1, Rhodobacter sphaeroides strain 2.4.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.