STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSP_0380Polyhydroxyalkanoate synthesis repressor PhaR; IMG reference gene:2512955390; PFAM: PHB accumulation regulatory domain; PHB/PHA accumulation regulator DNA-binding domain; TIGRFAM: polyhydroxyalkanoate synthesis repressor PhaR. (184 aa)    
Predicted Functional Partners:
RSP_0381
Hypothetical protein; IMG reference gene:2512955391.
 
   
 0.886
RSP_0382
IMG reference gene:2512955392; PFAM: Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus; TIGRFAM: poly(R)-hydroxyalkanoic acid synthase, class I.
 
   
 0.886
RSP_0383
Polyhydroxyalkanoate depolymerase, intracellular; IMG reference gene:2512955393; PFAM: PHB de-polymerase C-terminus; TIGRFAM: polyhydroxyalkanoate depolymerase, intracellular.
 
  
 0.806
phbC
Putative polyhydroxyalkanoic synthase, PHA synthase; IMG reference gene:2512956301; PFAM: Poly-beta-hydroxybutyrate polymerase N terminal; Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus; alpha/beta hydrolase fold; TIGRFAM: poly(R)-hydroxyalkanoic acid synthase, class I.
 
   
 0.802
RSP_0747
3-oxoacyl-(acyl-carrier-protein) reductase; IMG reference gene:2512955771; PFAM: short chain dehydrogenase; TIGRFAM: acetoacetyl-CoA reductase.
 
   
 0.523
RSP_6045
Hypothetical protein; IMG reference gene:2512954271.
  
     0.454
RSP_1255
Phosphate acetyltransferase; IMG reference gene:2512956299; PFAM: MaoC like domain; Phosphate acetyl/butaryl transferase.
  
   
 0.427
fur-2
Putative Ferric-uptake regulator; IMG reference gene:2512956688; PFAM: Ferric uptake regulator family; Belongs to the Fur family.
   
  
 0.417
fur
Manganese uptake regulator, Fur family; IMG reference gene:2512954440; PFAM: Ferric uptake regulator family; Belongs to the Fur family.
   
  
 0.410
acpP1
Acyl carrier protein, AcpP; IMG reference gene:2512954726; PFAM: Phosphopantetheine attachment site; TIGRFAM: acyl carrier protein.
  
    0.409
Your Current Organism:
Rhodobacter sphaeroides 241
NCBI taxonomy Id: 272943
Other names: R. sphaeroides 2.4.1, Rhodobacter sphaeroides 2.4.1, Rhodobacter sphaeroides ATCC 17023, Rhodobacter sphaeroides ATH 2.4.1, Rhodobacter sphaeroides str. 2.4.1, Rhodobacter sphaeroides strain 2.4.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.