STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSP_0418Hypothetical protein; IMG reference gene:2512955431; PFAM: Protein of unknown function (DUF983). (136 aa)    
Predicted Functional Partners:
RSP_0419
NTP pyrophosphohydrolase; IMG reference gene:2512955432; PFAM: NUDIX domain.
 
    0.874
cox11
Cytochrome C oxidase assembly protein; Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I; Belongs to the COX11/CtaG family.
 
    0.694
RSP_1876
Integral membrane protein; IMG reference gene:2512953786; PFAM: Integral membrane protein (DUF2244).
  
    0.678
RSP_0631
Hypothetical protein; IMG reference gene:2512955647; PFAM: Uncharacterised protein family (UPF0262); Belongs to the UPF0262 family.
 
   
 0.598
RSP_0416
Putative calcium-binding EF-hand domain protein; IMG reference gene:2512955430.
       0.556
RSP_0415
RNA polymerase, sigma subunit, ECF family; IMG reference gene:2512955429; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; Belongs to the sigma-70 factor family. ECF subfamily.
       0.547
RSP_1857
Hypothetical protein; IMG reference gene:2512953766.
  
     0.545
RSP_6227
Hypothetical protein; IMG reference gene:2512955428.
       0.493
RSP_0414
Putative integral membrane protein; IMG reference gene:2512955427.
       0.476
RSP_0705
Cytochrome cy; IMG reference gene:2512955726; PFAM: Cytochrome c.
  
    0.474
Your Current Organism:
Rhodobacter sphaeroides 241
NCBI taxonomy Id: 272943
Other names: R. sphaeroides 2.4.1, Rhodobacter sphaeroides 2.4.1, Rhodobacter sphaeroides ATCC 17023, Rhodobacter sphaeroides ATH 2.4.1, Rhodobacter sphaeroides str. 2.4.1, Rhodobacter sphaeroides strain 2.4.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.