STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSP_0429Putative ABC drug/toxin efflux transporter; IMG reference gene:2512955442; PFAM: ABC transporter transmembrane region; ABC transporter. (618 aa)    
Predicted Functional Partners:
RSP_3159
ABC transporter, 2 fused ATPase and 1 inner membrane subunits; IMG reference gene:2512956668; PFAM: ABC transporter.
  
0.545
RSP_2696
ABC transporter, fused ATPase and inner membrane subunits; IMG reference gene:2512954640; PFAM: ABC transporter transmembrane region; ABC transporter.
    
0.544
cbbX
CbbX protein; IMG reference gene:2512956325; PFAM: ATPase family associated with various cellular activities (AAA); TIGRFAM: probable Rubsico expression protein CbbX; truncated by 32 aa.
   
 0.503
psuG
IndA involved in pigment biosynthesis; Catalyzes the reversible cleavage of pseudouridine 5'- phosphate (PsiMP) to ribose 5-phosphate and uracil. Functions biologically in the cleavage direction, as part of a pseudouridine degradation pathway; Belongs to the pseudouridine-5'-phosphate glycosidase family.
 
      0.456
RSP_2586
ABC multidrug efflux transporter, ATPase subunit; IMG reference gene:2512954529; PFAM: ABC transporter; TIGRFAM: ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system.
  
0.438
RSP_0428
Hypothetical protein; IMG reference gene:2512955441.
  
    0.432
RSP_3274
ABC multidrug/carbohydrate efflux transporter, ATPase subunit; IMG reference gene:2512956780; PFAM: ABC transporter.
 
0.432
RSP_1299
Putative binding domain protein; IMG reference gene:2512956344.
   
 0.429
RSP_2143
DNA photolyase, Cryptochrome 1 apoprotein (Blue light photoreceptor); IMG reference gene:2512954067; PFAM: FAD binding domain of DNA photolyase; DNA photolyase.
   
 
 0.413
dnaK
Heat shock protein (Hsp70, DnaK); Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.405
Your Current Organism:
Rhodobacter sphaeroides 241
NCBI taxonomy Id: 272943
Other names: R. sphaeroides 2.4.1, Rhodobacter sphaeroides 2.4.1, Rhodobacter sphaeroides ATCC 17023, Rhodobacter sphaeroides ATH 2.4.1, Rhodobacter sphaeroides str. 2.4.1, Rhodobacter sphaeroides strain 2.4.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.