Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| RSP_0525 | RSP_0526 | RSP_0525 | RSP_0526 | Putative membrane protein, hemolysin III; IMG reference gene:2512955537; PFAM: Haemolysin-III related; TIGRFAM: channel protein, hemolysin III family. | Hypothetical protein; IMG reference gene:2512955538; PFAM: Protein of unknown function (DUF1810). | 0.762 |
| RSP_0525 | ku-2 | RSP_0525 | RSP_0524 | Putative membrane protein, hemolysin III; IMG reference gene:2512955537; PFAM: Haemolysin-III related; TIGRFAM: channel protein, hemolysin III family. | Ku protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family. | 0.517 |
| RSP_0526 | RSP_0525 | RSP_0526 | RSP_0525 | Hypothetical protein; IMG reference gene:2512955538; PFAM: Protein of unknown function (DUF1810). | Putative membrane protein, hemolysin III; IMG reference gene:2512955537; PFAM: Haemolysin-III related; TIGRFAM: channel protein, hemolysin III family. | 0.762 |
| RSP_0526 | ku-2 | RSP_0526 | RSP_0524 | Hypothetical protein; IMG reference gene:2512955538; PFAM: Protein of unknown function (DUF1810). | Ku protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family. | 0.511 |
| ku-2 | RSP_0525 | RSP_0524 | RSP_0525 | Ku protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family. | Putative membrane protein, hemolysin III; IMG reference gene:2512955537; PFAM: Haemolysin-III related; TIGRFAM: channel protein, hemolysin III family. | 0.517 |
| ku-2 | RSP_0526 | RSP_0524 | RSP_0526 | Ku protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family. | Hypothetical protein; IMG reference gene:2512955538; PFAM: Protein of unknown function (DUF1810). | 0.511 |