STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSP_0580Putative sulfate transporter, SulP family; IMG reference gene:2512955595; PFAM: Sulfate transporter family; STAS domain; TIGRFAM: high affinity sulphate transporter 1. (632 aa)    
Predicted Functional Partners:
fbcB
Cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
   
 
 0.857
RSP_3216
Putative DNA repair exonuclease; IMG reference gene:2512956728.
  
   0.846
RSP_0111
IMG reference gene:2512955102; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; old pseudo; frameshift corrected.
  
 
 0.813
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
    
   0.811
nuoM
IMG reference gene:2512954474; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M.
  
 
 0.802
RSP_1377
Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
 
  
 0.705
RSP_1087
Short-chain dehydrogenase/reductase family member; IMG reference gene:2512956132; PFAM: short chain dehydrogenase.
  
    0.644
RSP_1534
Putative acyl carrier protein; IMG reference gene:2512953427.
    
   0.631
acpP1
Acyl carrier protein, AcpP; IMG reference gene:2512954726; PFAM: Phosphopantetheine attachment site; TIGRFAM: acyl carrier protein.
    
   0.631
hmuS
Putative hemin transport protein; IMG reference gene:2512955233; PFAM: Haemin-degrading HenS.ChuX domain.
   
    0.623
Your Current Organism:
Rhodobacter sphaeroides 241
NCBI taxonomy Id: 272943
Other names: R. sphaeroides 2.4.1, Rhodobacter sphaeroides 2.4.1, Rhodobacter sphaeroides ATCC 17023, Rhodobacter sphaeroides ATH 2.4.1, Rhodobacter sphaeroides str. 2.4.1, Rhodobacter sphaeroides strain 2.4.1
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.