STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSP_0637Putative enzyme of the cupin superfamily; IMG reference gene:2512955656; PFAM: Protein of unknown function (DUF861). (241 aa)    
Predicted Functional Partners:
RSP_0638
IMG reference gene:2512955657; PFAM: FAD dependent oxidoreductase.
  
    0.796
RSP_0639
Putative N-methylhydantoinase B; IMG reference gene:2512955658; PFAM: Hydantoinase B/oxoprolinase.
  
    0.780
RSP_0640
Putative N-methylhydantoinase A; IMG reference gene:2512955659; PFAM: Hydantoinase/oxoprolinase; Hydantoinase/oxoprolinase N-terminal region.
  
    0.776
RSP_0641
Transcriptional regulator, XRE family with cupin sensor; IMG reference gene:2512955660; PFAM: Cupin domain; Helix-turn-helix.
  
  
 0.592
RSP_0636
TRAP-T family transporter, DctP (periplasmic binding) subunit; IMG reference gene:2512955655; PFAM: Bacterial extracellular solute-binding protein, family 7.
  
    0.572
RSP_0635
TRAP-T family transporter, DctQ (4 TMs) subunit; IMG reference gene:2512955654; PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component.
  
    0.551
RSP_0642
Putative transporter, RhaT family, DMT superfamily; IMG reference gene:2512955661; PFAM: EamA-like transporter family.
       0.463
RSP_0634
TRAP-T family transporter, DctM (12 TMs) subunit; IMG reference gene:2512955653; PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit.
  
    0.451
Your Current Organism:
Rhodobacter sphaeroides 241
NCBI taxonomy Id: 272943
Other names: R. sphaeroides 2.4.1, Rhodobacter sphaeroides 2.4.1, Rhodobacter sphaeroides ATCC 17023, Rhodobacter sphaeroides ATH 2.4.1, Rhodobacter sphaeroides str. 2.4.1, Rhodobacter sphaeroides strain 2.4.1
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