STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pheAPrephenate dehydratase; IMG reference gene:2512955727; PFAM: Prephenate dehydratase; truncated by 23 aa. (277 aa)    
Predicted Functional Partners:
aatA
Aspartate aminotransferase; IMG reference gene:2512955793; PFAM: Aminotransferase class I and II.
 
 
 0.990
RSP_3439
Aspartate aminotransferase; IMG reference gene:2512956950; PFAM: Aminotransferase class I and II.
 
 
 0.990
RSP_6215
IMG reference gene:2512954219; PFAM: Prephenate dehydrogenase.
 
 0.979
TyrB
Aromatic amino acid aminotransferase apoenzyme; IMG reference gene:2512955918; PFAM: Aminotransferase class I and II.
  
 
 0.975
pheAa
Chorismate mutase; IMG reference gene:2512956089; PFAM: Chorismate mutase type II; TIGRFAM: monofunctional chorismate mutase, alpha proteobacterial type.
  
 
 0.938
RSP_1984
IMG reference gene:2512953900; PFAM: Aminotransferase class I and II; TIGRFAM: histidinol-phosphate aminotransferase; truncated by 14 aa.
  
 
 0.924
hisC
IMG reference gene:2512954218; PFAM: Aminotransferase class I and II; TIGRFAM: histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
  
 
 0.924
trpC
IMG reference gene:2512953916; PFAM: Indole-3-glycerol phosphate synthase; Belongs to the TrpC family.
 
  
 0.904
ihfB
Integration host factor beta subunit; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family.
     
 0.876
trpD
Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA).
 
  
 0.852
Your Current Organism:
Rhodobacter sphaeroides 241
NCBI taxonomy Id: 272943
Other names: R. sphaeroides 2.4.1, Rhodobacter sphaeroides 2.4.1, Rhodobacter sphaeroides ATCC 17023, Rhodobacter sphaeroides ATH 2.4.1, Rhodobacter sphaeroides str. 2.4.1, Rhodobacter sphaeroides strain 2.4.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.