STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mucSTranscriptional regulator, MarR family; IMG reference gene:2512955790; truncated by 4 aa. (165 aa)    
Predicted Functional Partners:
fliP
Flagellar transport protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.
   
    0.867
fliP1
Type III secretion system inner membrane P protein; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.
   
    0.867
RSP_2177
DNA protecting protein DprA; IMG reference gene:2512954100; PFAM: DNA recombination-mediator protein A; TIGRFAM: DNA protecting protein DprA.
  
    0.854
comF
Competence protein F; IMG reference gene:2512956239; PFAM: Phosphoribosyl transferase domain.
  
    0.824
RSP_0761
Hypothetical protein; IMG reference gene:2512955791; PFAM: Protein of unknown function (DUF339).
 
    0.791
RSP_0410
Sensor diguanylate cyclase (GGDEF); IMG reference gene:2512955421; PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain.
   
    0.739
RSP_0813
IMG reference gene:2512955841; PFAM: Response regulator receiver domain.
   
    0.706
RSP_1383
IMG reference gene:2512956430; PFAM: Invasion associated locus B (IalB) protein.
  
     0.702
RSP_1315
Hypothetical protein; IMG reference gene:2512956361.
  
    0.697
RSP_0762
Transcriptional regulator, XRE family; IMG reference gene:2512955792.
  
    0.689
Your Current Organism:
Rhodobacter sphaeroides 241
NCBI taxonomy Id: 272943
Other names: R. sphaeroides 2.4.1, Rhodobacter sphaeroides 2.4.1, Rhodobacter sphaeroides ATCC 17023, Rhodobacter sphaeroides ATH 2.4.1, Rhodobacter sphaeroides str. 2.4.1, Rhodobacter sphaeroides strain 2.4.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.