STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSP_0809Nitroreductase; IMG reference gene:2512955837; PFAM: Nitroreductase family. (192 aa)    
Predicted Functional Partners:
RSP_0810
Uncharacterized protein involved in cysteine biosynthesis; IMG reference gene:2512955838.
  
    0.911
parA
Chromosome segregation ATPase; IMG reference gene:2512956271; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain.
  
  
 0.818
RSP_1042
ATPase involved in chromosome partitioning; IMG reference gene:2512956082; PFAM: ATPase MipZ.
  
  
 0.814
RSP_1423
ParA family ATPase; IMG reference gene:2512957358; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain.
  
  
 0.813
RSP_1056
Periplasmic sensor signal transduction histidine kinase; IMG reference gene:2512956097; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain.
  
   
 0.807
RSP_3159
ABC transporter, 2 fused ATPase and 1 inner membrane subunits; IMG reference gene:2512956668; PFAM: ABC transporter.
  
  
 0.807
RSP_1422
ParB-like nuclease; IMG reference gene:2512957357; PFAM: ParB-like nuclease domain; TIGRFAM: ParB-like partition proteins.
  
  
 0.782
RSP_3218
5,6-dimethylbenzimidazole synthase; IMG reference gene:2512956729; PFAM: Nitroreductase family; TIGRFAM: cob(II)yrinic acid a,c-diamide reductase.
   
  
 0.722
slp
Slp; IMG reference gene:2512955034; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain.
     
 0.713
rnfC
4Fe-4S ferredoxin, RnfC; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily.
   
  
 0.645
Your Current Organism:
Rhodobacter sphaeroides 241
NCBI taxonomy Id: 272943
Other names: R. sphaeroides 2.4.1, Rhodobacter sphaeroides 2.4.1, Rhodobacter sphaeroides ATCC 17023, Rhodobacter sphaeroides ATH 2.4.1, Rhodobacter sphaeroides str. 2.4.1, Rhodobacter sphaeroides strain 2.4.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.