STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSP_0896Hypothetical protein; IMG reference gene:2512955928; PFAM: Protein of unknown function, DUF482; trucated by 22 aa. (392 aa)    
Predicted Functional Partners:
DCOHM
Pterin dehydratase; IMG reference gene:2512955930; PFAM: Pterin 4 alpha carbinolamine dehydratase.
  
    0.836
RSP_0897
IMG reference gene:2512955929; PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain.
 
    0.820
bpt
arginyl-tRNA-protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily.
 
     0.692
RSP_0895
Phosphodiesterase; IMG reference gene:2512955927; PFAM: Glycerophosphoryl diester phosphodiesterase family.
  
    0.675
RSP_0894
Putative translation initiation inhibitor, yjgF family; IMG reference gene:2512955926; PFAM: Endoribonuclease L-PSP.
  
    0.658
clpS
ATP-dependent Clp protease adaptor protein clpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family.
 
    0.516
hrcA
Heat-inducible transcription repressor HrcA; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons.
  
    0.506
RSP_0893
IMG reference gene:2512955925; PFAM: HlyD family secretion protein; TIGRFAM: type I secretion membrane fusion protein, HlyD family.
  
    0.463
RSP_0892
ABC protein toxin exporter, fused ATPase and inner membrane domain protein; IMG reference gene:2512955924; PFAM: ABC transporter transmembrane region; ABC transporter; TIGRFAM: type I secretion system ABC transporter, PrtD family.
       0.462
RSP_3564
Generic methyltransferase; IMG reference gene:2512957074; PFAM: Protein of unknown function (DUF938).
 
    0.460
Your Current Organism:
Rhodobacter sphaeroides 241
NCBI taxonomy Id: 272943
Other names: R. sphaeroides 2.4.1, Rhodobacter sphaeroides 2.4.1, Rhodobacter sphaeroides ATCC 17023, Rhodobacter sphaeroides ATH 2.4.1, Rhodobacter sphaeroides str. 2.4.1, Rhodobacter sphaeroides strain 2.4.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.