STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sitCABC Mn+2/Fe+2 transporter, inner membrane subunit SitC; IMG reference gene:2512955938; PFAM: ABC 3 transport family. (286 aa)    
Predicted Functional Partners:
sitA
ABC Mn+2/Fe+2 transporter, periplasmic substrate-binding protein SitA; IMG reference gene:2512955936; PFAM: Periplasmic solute binding protein family; Belongs to the bacterial solute-binding protein 9 family.
 
 0.999
sitB
ABC Mn+2/Fe+2 transporter, ATPase subunit SitB; IMG reference gene:2512955937; PFAM: ABC transporter.
 0.999
sitD
ABC Mn+2/Fe+2 transporter, inner membrane subunit SitD; IMG reference gene:2512955939; PFAM: ABC 3 transport family.
 
 
 
0.982
znuC
ABC zinc transporter, ATPase subunit ZnuC; Part of the ABC transporter complex ZnuABC involved in zinc import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Zinc importer (TC 3.A.1.15.5) family.
 
 0.961
znuA
ABC zinc transporter, periplasmic binding protein ZnuA; IMG reference gene:2512957080; PFAM: Periplasmic solute binding protein family.
 
  
 0.804
RSP_3117
Putative periplasmic or secreted protein; IMG reference gene:2512956623; PFAM: YodA.
  
  
 0.788
expE1
IMG reference gene:2512957020; PFAM: Hemolysin-type calcium-binding repeat (2 copies); TIGRFAM: type 1 secretion C-terminal target domain (VC_A0849 subclass).
   
  
 0.711
RSP_0850
Hypothetical protein; IMG reference gene:2512955880; PFAM: VIT family; Rubrerythrin.
   
  
 0.674
RSP_1113
IMG reference gene:2512956157; PFAM: Hemolysin-type calcium-binding repeat (2 copies).
      
 0.639
RSP_3094
Putative transmembrane anti-sigma factor; IMG reference gene:2512956596; extended by 3 aa.
  
  
 0.617
Your Current Organism:
Rhodobacter sphaeroides 241
NCBI taxonomy Id: 272943
Other names: R. sphaeroides 2.4.1, Rhodobacter sphaeroides 2.4.1, Rhodobacter sphaeroides ATCC 17023, Rhodobacter sphaeroides ATH 2.4.1, Rhodobacter sphaeroides str. 2.4.1, Rhodobacter sphaeroides strain 2.4.1
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.