STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSP_0914Short-chain dehydrogenase/reductase SDR; IMG reference gene:2512955946; PFAM: short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (250 aa)    
Predicted Functional Partners:
crt
Enoyl-CoA hydratase; IMG reference gene:2512955945; PFAM: Enoyl-CoA hydratase/isomerase family; Belongs to the enoyl-CoA hydratase/isomerase family.
  
  
 0.855
RSP_0684
Putative oxidoreductase; IMG reference gene:2512955705; PFAM: short chain dehydrogenase.
    0.778
fabG1
Short-chain dehydrogenase/reductase; IMG reference gene:2512954482; PFAM: short chain dehydrogenase.
 
    0.713
RSP_0915
Hypothetical protein; IMG reference gene:2512955947; PFAM: Uncharacterized protein conserved in bacteria (DUF2125).
  
    0.626
RSP_1075
IMG reference gene:2512956116; PFAM: short chain dehydrogenase; truncated by 9 aa.
 
    0.503
RSP_0754
Hypothetical protein; IMG reference gene:2512955782.
   
    0.457
RSP_2640
Putative membrane protein/domain protein; IMG reference gene:2512954583; PFAM: RDD family.
  
     0.439
RSP_1515
LPS:glycosyltransferase; IMG reference gene:2512953410; PFAM: Glycosyl transferase family 8.
  
    0.437
ucpA
IMG reference gene:2512953947; PFAM: short chain dehydrogenase.
    0.436
RSP_0169
Na+/solute symporter; IMG reference gene:2512955167; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain.
  
    0.416
Your Current Organism:
Rhodobacter sphaeroides 241
NCBI taxonomy Id: 272943
Other names: R. sphaeroides 2.4.1, Rhodobacter sphaeroides 2.4.1, Rhodobacter sphaeroides ATCC 17023, Rhodobacter sphaeroides ATH 2.4.1, Rhodobacter sphaeroides str. 2.4.1, Rhodobacter sphaeroides strain 2.4.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.