STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSP_0940ABC transporter, periplasmic substrate binding protein; IMG reference gene:2512955975; PFAM: NMT1/THI5 like. (335 aa)    
Predicted Functional Partners:
RSP_0941
ABC transporter, ATPase subunit; IMG reference gene:2512955976; PFAM: ABC transporter.
 
  
 0.944
RSP_0942
ABC transporter, inner membrane subunit; IMG reference gene:2512955977; PFAM: Binding-protein-dependent transport system inner membrane component.
 
  
 0.943
RSP_2598
ABC transporter, inner membrane subunit; IMG reference gene:2512954541; PFAM: Binding-protein-dependent transport system inner membrane component.
 
  
 0.695
RSP_0180
ABC nitrate/sulfonate/bicarbonate transporter, inner membrane subunit; IMG reference gene:2512955177; PFAM: Binding-protein-dependent transport system inner membrane component.
 
  
 0.687
RSP_0181
ABC nitrate/sulfonate/bicarbonate transporter, inner membrane subunit; IMG reference gene:2512955178; PFAM: Binding-protein-dependent transport system inner membrane component.
 
  
 0.652
RSP_0644
ABC transporter, inner membrane subunit; IMG reference gene:2512955663; PFAM: Binding-protein-dependent transport system inner membrane component.
 
  
 0.647
RSP_3166
ABC transporter, inner membrane subunit; IMG reference gene:2512956676; PFAM: Binding-protein-dependent transport system inner membrane component.
 
  
 0.630
RSP_3167
ABC transporter, ATPase subunit; IMG reference gene:2512956677; PFAM: ABC transporter.
 
  
 0.538
RSP_2596
ABC transporter, ATPase subunit; IMG reference gene:2512954539; PFAM: ABC transporter.
 
  
 0.500
RSP_0939
Hypothetical protein; IMG reference gene:2512955974; PFAM: Protein of unknown function DUF72.
  
    0.491
Your Current Organism:
Rhodobacter sphaeroides 241
NCBI taxonomy Id: 272943
Other names: R. sphaeroides 2.4.1, Rhodobacter sphaeroides 2.4.1, Rhodobacter sphaeroides ATCC 17023, Rhodobacter sphaeroides ATH 2.4.1, Rhodobacter sphaeroides str. 2.4.1, Rhodobacter sphaeroides strain 2.4.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.