STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSP_1006Hypothetical protein; IMG reference gene:2512956044. (188 aa)    
Predicted Functional Partners:
RSP_0251
IMG reference gene:2512955257; PFAM: Outer membrane efflux protein; TIGRFAM: type I secretion outer membrane protein, TolC family.
 
 
 0.872
RSP_1007
RNA methyltransferase, RsmE family; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.
  
    0.844
RSP_1009
IMG reference gene:2512956047; PFAM: Putative phospholipid-binding domain; OmpA family.
 
    0.830
gshA
Putative glutathione synthetase; Catalyzes the synthesis of gamma-glutamylcysteine (gamma-GC). Belongs to the glutamate--cysteine ligase type 2 family. EgtA subfamily.
       0.738
RSP_6113
IMG reference gene:2512955375; PFAM: Protein of unknown function (DUF2842).
  
     0.732
ubiA
4-hydroxybenzoate polyprenyltransferase; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate.
  
    0.727
RSP_1857
Hypothetical protein; IMG reference gene:2512953766.
  
     0.722
RSP_0381
Hypothetical protein; IMG reference gene:2512955391.
  
     0.711
RSP_1011
Hypothetical protein; IMG reference gene:2512956048.
 
     0.695
RSP_6204
Outer membrane protein; IMG reference gene:2512954657; PFAM: Outer membrane protein (OmpH-like).
  
     0.693
Your Current Organism:
Rhodobacter sphaeroides 241
NCBI taxonomy Id: 272943
Other names: R. sphaeroides 2.4.1, Rhodobacter sphaeroides 2.4.1, Rhodobacter sphaeroides ATCC 17023, Rhodobacter sphaeroides ATH 2.4.1, Rhodobacter sphaeroides str. 2.4.1, Rhodobacter sphaeroides strain 2.4.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.