STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSP_1009IMG reference gene:2512956047; PFAM: Putative phospholipid-binding domain; OmpA family. (652 aa)    
Predicted Functional Partners:
RSP_1011
Hypothetical protein; IMG reference gene:2512956048.
 
     0.835
RSP_1006
Hypothetical protein; IMG reference gene:2512956044.
 
    0.830
RSP_6204
Outer membrane protein; IMG reference gene:2512954657; PFAM: Outer membrane protein (OmpH-like).
 
 
 0.817
RSP_2778
IMG reference gene:2512954728; PFAM: Invasion associated locus B (IalB) protein.
  
  
 0.726
ubiA
4-hydroxybenzoate polyprenyltransferase; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate.
  
    0.719
RSP_2097
Putative FtsL; IMG reference gene:2512954021.
  
     0.716
tolB
Translocation protein TolB precursor; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
 
 0.697
RSP_2327
Hypothetical protein; IMG reference gene:2512954261.
  
     0.691
RSP_0453
Hypothetical protein; IMG reference gene:2512955463.
  
     0.674
RSP_2942
Sporulation and cell division-related protein; IMG reference gene:2512954907; PFAM: Sporulation related domain.
  
     0.662
Your Current Organism:
Rhodobacter sphaeroides 241
NCBI taxonomy Id: 272943
Other names: R. sphaeroides 2.4.1, Rhodobacter sphaeroides 2.4.1, Rhodobacter sphaeroides ATCC 17023, Rhodobacter sphaeroides ATH 2.4.1, Rhodobacter sphaeroides str. 2.4.1, Rhodobacter sphaeroides strain 2.4.1
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.