STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSP_1115Hypothetical protein; IMG reference gene:2512956159; extended by 86 aa. (681 aa)    
Predicted Functional Partners:
RSP_1117
Hypothetical protein; IMG reference gene:2512956161.
  
    0.812
RSP_1120
IMG reference gene:2512956164; PFAM: HlyD family secretion protein; TIGRFAM: type I secretion membrane fusion protein, HlyD family.
  
    0.781
RSP_1116
Glycosyltransferase; IMG reference gene:2512956160; PFAM: Glycosyl transferases group 1.
  
    0.776
RSP_1118
Group 1 glycosyltransferase; IMG reference gene:2512956162; PFAM: Glycosyl transferases group 1.
  
    0.775
RSP_1119
ABC protein exporter, fused ATPase and inner membrane subunits; IMG reference gene:2512956163; PFAM: ABC transporter; TIGRFAM: type I secretion system ABC transporter, PrtD family.
  
    0.774
RSP_1114
IMG reference gene:2512956158; PFAM: Hemolysin-type calcium-binding repeat (2 copies).
  
    0.600
RSP_1121
Acetyl transferase, Isoleucine patch superfamily; IMG reference gene:2512956165; PFAM: Bacterial transferase hexapeptide (three repeats).
  
    0.579
RSP_1122
Hypothetical protein; IMG reference gene:2512956166.
  
    0.573
RSP_1848
Pyruvate kinase; IMG reference gene:2512953757; PFAM: Pyruvate kinase, barrel domain; Belongs to the pyruvate kinase family.
   
    0.457
RSP_2472
IMG reference gene:2512954414; TIGRFAM: phage conserved hypothetical protein, phiE125 gp8 family.
   
    0.457
Your Current Organism:
Rhodobacter sphaeroides 241
NCBI taxonomy Id: 272943
Other names: R. sphaeroides 2.4.1, Rhodobacter sphaeroides 2.4.1, Rhodobacter sphaeroides ATCC 17023, Rhodobacter sphaeroides ATH 2.4.1, Rhodobacter sphaeroides str. 2.4.1, Rhodobacter sphaeroides strain 2.4.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.