STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSP_1185Hypothetical protein; IMG reference gene:2512956230. (76 aa)    
Predicted Functional Partners:
RSP_1184
Ribonuclease BN; IMG reference gene:2512956229; PFAM: Ribonuclease BN-like family; TIGRFAM: YihY family protein (not ribonuclease BN).
       0.566
RSP_1186
IMG reference gene:2512956231; PFAM: Protein of unknown function (DUF2886); extended by 7 aa.
  
    0.544
RSP_1187
Putative lipoprotein DUF940; IMG reference gene:2512956232; PFAM: Bacterial putative lipoprotein (DUF940).
       0.543
RSP_0747
3-oxoacyl-(acyl-carrier-protein) reductase; IMG reference gene:2512955771; PFAM: short chain dehydrogenase; TIGRFAM: acetoacetyl-CoA reductase.
   
    0.437
wcaG
Nucleotide sugar epimerase/dehydratase; IMG reference gene:2512956233; PFAM: Polysaccharide biosynthesis protein.
  
    0.414
Your Current Organism:
Rhodobacter sphaeroides 241
NCBI taxonomy Id: 272943
Other names: R. sphaeroides 2.4.1, Rhodobacter sphaeroides 2.4.1, Rhodobacter sphaeroides ATCC 17023, Rhodobacter sphaeroides ATH 2.4.1, Rhodobacter sphaeroides str. 2.4.1, Rhodobacter sphaeroides strain 2.4.1
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.